miRBase entry: dno-mir-199-1

Stem-loop dno-mir-199-1

Accession

MI0039032

Description

Dasypus novemcinctus dno-mir-199-1 precursor miRNA

Sequence

CCCAGUGUUCAGACUACCUGUUCaggacaaugccguuguACAGUAGUCUGCACAUUGGUUA
.(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))...

Structure

--C       U        C   U  --  ac 
   CCAGUGU CAGACUAC UGU Ca  gg  a
   ||||||| |||||||| ||| ||  ||   
   GGUUACA GUCUGAUG ACA gu  cc  a
AUU       C        -   u  ug  gu

Annotation confidence Not enough data

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Genome context

JH566029.1: 1167422-1167482 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dno-mir-199-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-199-5p

Accession	MIMAT0047737
Description	Dasypus novemcinctus dno-miR-199-5p mature miRNA
Sequence	1 - CCCAGUGUUCAGACUACCUGUUC - 23
Evidence	experimental Illumina [1]

Mature dno-miR-199-3p

Accession	MIMAT0047738
Description	Dasypus novemcinctus dno-miR-199-3p mature miRNA
Sequence	40 - ACAGUAGUCUGCACAUUGGUUA - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344