Stem-loop dno-mir-200b

Accession

MI0039034

Description

Dasypus novemcinctus dno-mir-200b precursor miRNA

Sequence

12846 reads, 736.0 reads per million, 1 experiments

CAUCUUACUGGGCAGCAUUGGAUGGugucuggucucUAAUACUGCCUGGUAACGAUGAc
(((((((((((((((.((((((.((.......)))))))).))))))))))).))))..

Structure

--    -           C      U  ug 
  CAUC UUACUGGGCAG AUUGGA GG  u
  |||| ||||||||||| |||||| ||  c
  GUAG AAUGGUCCGUC UAAUcu cu  u
cA    C           A      -  gg 

Annotation confidence High

Genome context

JH582619.1: 456846-456904 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dno-mir-200b

Mature dno-miR-200b-5p

• Accession: MIMAT0047740
• Description: Dasypus novemcinctus dno-miR-200b-5p mature miRNA
• Sequence: 1 - CAUCUUACUGGGCAGCAUUGGAUGG - 25
• Evidence: experimental ; Illumina [1]

Mature dno-miR-200b-3p

• Accession: MIMAT0047741
• Description: Dasypus novemcinctus dno-miR-200b-3p mature miRNA
• Sequence: 37 - UAAUACUGCCUGGUAACGAUGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344