miRBase entry: dno-mir-200b

Stem-loop dno-mir-200b

Accession

MI0039034

Description

Dasypus novemcinctus dno-mir-200b precursor miRNA

Sequence

CAUCUUACUGGGCAGCAUUGGAuggugucuggucucUAAUACUGCCUGGUAACGAUGAC
(((((((((((((((.((((((.((.......)))))))).))))))))))).))))..

Structure

--    -           C      u  ug 
  CAUC UUACUGGGCAG AUUGGA gg  u
  |||| ||||||||||| |||||| ||  c
  GUAG AAUGGUCCGUC UAAUcu cu  u
CA    C           A      -  gg

Annotation confidence Not enough data

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Genome context

JH582619.1: 456846-456904 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dno-mir-200b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-200b-5p

Accession	MIMAT0047740
Description	Dasypus novemcinctus dno-miR-200b-5p mature miRNA
Sequence	1 - CAUCUUACUGGGCAGCAUUGGA - 22
Evidence	experimental Illumina [1]

Mature dno-miR-200b-3p

Accession	MIMAT0047741
Description	Dasypus novemcinctus dno-miR-200b-3p mature miRNA
Sequence	37 - UAAUACUGCCUGGUAACGAUGAC - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344