miRBase entry: dno-mir-222

Stem-loop dno-mir-222

Accession

MI0039053

Description

Dasypus novemcinctus dno-mir-222 precursor miRNA

Sequence

GGCUCAGUAGCCAGUGUAGAUCCugucuuuuguaaucagcAGCUACAUCUGGCUACUGGGUCUC
(((((((((((((((((((...(((...........)))...))))).))))))))))))))..

Structure

--              -     AUC   ucuu 
  GGCUCAGUAGCCAG UGUAG   Cug    u
  |||||||||||||| |||||   |||    u
  CUGGGUCAUCGGUC ACAUC   gac    g
CU              U     GAc   uaau

Annotation confidence Not enough data

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Genome context

JH568173.1: 139430-139493 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dno-mir-222

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-222-5p

Accession	MIMAT0047777
Description	Dasypus novemcinctus dno-miR-222-5p mature miRNA
Sequence	1 - GGCUCAGUAGCCAGUGUAGAUCC - 23
Evidence	experimental Illumina [1]

Mature dno-miR-222-3p

Accession	MIMAT0047778
Description	Dasypus novemcinctus dno-miR-222-3p mature miRNA
Sequence	41 - AGCUACAUCUGGCUACUGGGUCUC - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344