Stem-loop dno-mir-339

Accession

MI0039075

Description

Dasypus novemcinctus dno-mir-339 precursor miRNA

Literature search

1 open access papers mention dno-mir-339
(1 sentences)

Sequence

388 reads, 22.0 reads per million, 1 experiments

UCCCUGUCCUCCAGGAGCUCAcgugggucaggcugUGAGCGCCUCGAGGGCAGAGCCc
...((((((((.(((.((((((((.......)).)))))).))).)))))))).....

Structure

--UCC        C   A      -  gg 
     CUGUCCUC AGG GCUCAc gu  g
     |||||||| ||| |||||| ||  u
     GACGGGAG UCC CGAGUg cg  c
cCCGA        C   G      u  ga 

Annotation confidence High

Genome context

JH583004.1: 187782-187839 [+]

Mature dno-miR-339-5p

• Accession: MIMAT0047821
• Description: Dasypus novemcinctus dno-miR-339-5p mature miRNA
• Sequence: 1 - UCCCUGUCCUCCAGGAGCUCA - 21
• Evidence: experimental ; Illumina [1]

Mature dno-miR-339-3p

• Accession: MIMAT0047822
• Description: Dasypus novemcinctus dno-miR-339-3p mature miRNA
• Sequence: 36 - UGAGCGCCUCGAGGGCAGAGCC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344