Stem-loop dno-mir-342

Accession

MI0039077

Description

Dasypus novemcinctus dno-mir-342 precursor miRNA

Sequence

3647 reads, 209.0 reads per million, 1 experiments

AGGGGUGCUAUCUGUGAUUGAGGgacaugguaaauggaauugUCUCACACAGAAAUCGCACCCGUca
..((((((..((((((..(((((.((((.....)))....).)))))))))))....))))))....

Structure

--AG      --UA      AU     g ----   g 
    GGGUGC    UCUGUG  UGAGG a    cau g
    ||||||    ||||||  ||||| |    ||| u
    CCCACG    AGACAC  ACUCU u    gua a
acUG      CUAA      --     g uaag   a 

Annotation confidence High

Genome context

JH561489.1: 96895-96961 [-]

Mature dno-miR-342-5p

• Accession: MIMAT0047825
• Description: Dasypus novemcinctus dno-miR-342-5p mature miRNA
• Sequence: 1 - AGGGGUGCUAUCUGUGAUUGAGG - 23
• Evidence: experimental ; Illumina [1]

Mature dno-miR-342-3p

• Accession: MIMAT0047826
• Description: Dasypus novemcinctus dno-miR-342-3p mature miRNA
• Sequence: 43 - UCUCACACAGAAAUCGCACCCGU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344