Stem-loop dno-mir-409

Accession

MI0039100

Description

Dasypus novemcinctus dno-mir-409 precursor miRNA

Sequence

ugguacgcggggagAGGUUACCCGAGCAACUUUGCAUCuggacgacGAAUGUUGCUCGGUGAACCCCUcuucgguauca
((((((.(((((((.((((..((((((((((((((........).)))).)))))))))..)))).)))))))))))))

Structure

      g       A    AC         -    - AUC 
ugguac cggggag GGUU  CCGAGCAAC UUUG C   u
|||||| ||||||| ||||  ||||||||| |||| |    
acuaug gcuucUC CCAA  GGCUCGUUG AAGc g   g
      -       C    GU         U    a cag 

Annotation confidence Not enough data

Genome context

JH578221.1: 165404-165482 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from dno-mir-409

Mature dno-miR-409-5p

• Accession: MIMAT0047870
• Description: Dasypus novemcinctus dno-miR-409-5p mature miRNA
• Sequence: 15 - AGGUUACCCGAGCAACUUUGCAUC - 38
• Evidence: experimental ; Illumina [1]

Mature dno-miR-409-3p

• Accession: MIMAT0047871
• Description: Dasypus novemcinctus dno-miR-409-3p mature miRNA
• Sequence: 47 - GAAUGUUGCUCGGUGAACCCCU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344