miRBase entry: dno-mir-409

Stem-loop dno-mir-409

Accession

MI0039100

Description

Dasypus novemcinctus dno-mir-409 precursor miRNA

Sequence

ugguacgcggggagAGGUUACCCGAGCAACUUUGCAUCuggacgacGAAUGUUGCUCGGUGAACCCCUcuucgguauca
((((((.(((((((.((((..((((((((((((((........).)))).)))))))))..)))).)))))))))))))

Structure

      g       A    AC         -    - AUC 
ugguac cggggag GGUU  CCGAGCAAC UUUG C   u
|||||| ||||||| ||||  ||||||||| |||| |    
acuaug gcuucUC CCAA  GGCUCGUUG AAGc g   g
      -       C    GU         U    a cag

Annotation confidence Not enough data

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Genome context

JH578221.1: 165404-165482 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from dno-mir-409

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-409-5p

Accession	MIMAT0047870
Description	Dasypus novemcinctus dno-miR-409-5p mature miRNA
Sequence	15 - AGGUUACCCGAGCAACUUUGCAUC - 38
Evidence	experimental Illumina [1]

Mature dno-miR-409-3p

Accession	MIMAT0047871
Description	Dasypus novemcinctus dno-miR-409-3p mature miRNA
Sequence	47 - GAAUGUUGCUCGGUGAACCCCU - 68
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344