Stem-loop dno-mir-425

Accession

MI0039107

Description

Dasypus novemcinctus dno-mir-425 precursor miRNA

Sequence

2116 reads, 121.0 reads per million, 1 experiments

AAUGACACGAUCACUCCCGUUGaguggacacccaagaagcCAUCGGGAUUAUCGUGUCCGCCc
...((((((((...(((((.((.((((....)).....)))).)))))..)))))))).....

Structure

--AAU        CAC     U  a  -----  a 
     GACACGAU   UCCCG UG gu     gg c
     ||||||||   ||||| || ||     ||  
     CUGUGCUA   AGGGC AC cg     cc a
cCCGC        -UU     U  -  aagaa  c 

Annotation confidence High

Genome context

JH564313.1: 2587714-2587776 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dno-mir-425

Mature dno-miR-425-5p

• Accession: MIMAT0047884
• Description: Dasypus novemcinctus dno-miR-425-5p mature miRNA
• Sequence: 1 - AAUGACACGAUCACUCCCGUUG - 22
• Evidence: experimental ; Illumina [1]

Mature dno-miR-425-3p

• Accession: MIMAT0047885
• Description: Dasypus novemcinctus dno-miR-425-3p mature miRNA
• Sequence: 41 - CAUCGGGAUUAUCGUGUCCGCC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344