miRBase entry: dno-mir-500a

Stem-loop dno-mir-500a

Accession

MI0039135

Description

Dasypus novemcinctus dno-mir-500a precursor miRNA

Sequence

UAAUCCUUGCUACCUGGGUGAGAGUgcugucugaaugcaAUGCACCUGGGCAAGGAUUCGG
.(((((((((...(((((((....(((.........)))...))))))))))))))))...

Structure

--U         UAC       AGAG   ugu 
   AAUCCUUGC   CUGGGUG    Ugc   c
   |||||||||   |||||||    |||   u
   UUAGGAACG   GGUCCAC    acg   g
GGC         ---       -GUA   uaa

Annotation confidence Not enough data

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Genome context

JH569306.1: 1548488-1548548 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from dno-mir-500a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-500a-5p

Accession	MIMAT0047938
Description	Dasypus novemcinctus dno-miR-500a-5p mature miRNA
Sequence	1 - UAAUCCUUGCUACCUGGGUGAGAGU - 25
Evidence	experimental Illumina [1]

Mature dno-miR-500a-3p

Accession	MIMAT0047939
Description	Dasypus novemcinctus dno-miR-500a-3p mature miRNA
Sequence	40 - AUGCACCUGGGCAAGGAUUCGG - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344