Stem-loop dno-mir-500a

Accession

MI0039135

Description

Dasypus novemcinctus dno-mir-500a precursor miRNA

Sequence

22850 reads, 1310.0 reads per million, 1 experiments

UAAUCCUUGCUACCUGGGUGAGagugcugucugaaugcaAUGCACCUGGGCAAGGAUUCGG
.(((((((((...(((((((....(((.........)))...))))))))))))))))...

Structure

--U         UAC       AGag   ugu 
   AAUCCUUGC   CUGGGUG    ugc   c
   |||||||||   |||||||    |||   u
   UUAGGAACG   GGUCCAC    acg   g
GGC         ---       -GUA   uaa 

Annotation confidence High

Genome context

JH569306.1: 1548488-1548548 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from dno-mir-500a

Mature dno-miR-500a-5p

• Accession: MIMAT0047938
• Description: Dasypus novemcinctus dno-miR-500a-5p mature miRNA
• Sequence: 1 - UAAUCCUUGCUACCUGGGUGAG - 22
• Evidence: experimental ; Illumina [1]

Mature dno-miR-500a-3p

• Accession: MIMAT0047939
• Description: Dasypus novemcinctus dno-miR-500a-3p mature miRNA
• Sequence: 40 - AUGCACCUGGGCAAGGAUUCGG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344