miRBase entry: dno-mir-500b

Stem-loop dno-mir-500b

Accession

MI0039136

Description

Dasypus novemcinctus dno-mir-500b precursor miRNA

Sequence

UAAUCCUUGCUACCUGGGUGAGAGUgcuuuuuugaaugcaAUGCACCUGGGCAAGGAUUCAGA
.(((((((((...(((((((....(((..........)))...))))))))))))))))....

Structure

---U         UAC       AGAG   uuuu 
    AAUCCUUGC   CUGGGUG    Ugc    u
    |||||||||   |||||||    |||     
    UUAGGAACG   GGUCCAC    acg    u
AGAC         ---       -GUA   uaag

Annotation confidence Not enough data

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Genome context

JH569306.1: 1550649-1550711 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from dno-mir-500b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-500b-5p

Accession	MIMAT0047940
Description	Dasypus novemcinctus dno-miR-500b-5p mature miRNA
Sequence	1 - UAAUCCUUGCUACCUGGGUGAGAGU - 25
Evidence	experimental Illumina [1]

Mature dno-miR-500b-3p

Accession	MIMAT0047941
Description	Dasypus novemcinctus dno-miR-500b-3p mature miRNA
Sequence	41 - AUGCACCUGGGCAAGGAUUCAGA - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344