miRBase entry: dno-mir-509b

Stem-loop dno-mir-509b

Accession

MI0039146

Description

Dasypus novemcinctus dno-mir-509b precursor miRNA

Sequence

UACUCCAGAGCGUGGCAAUCAUGuauaauuaaaugUGACUGGCACCUCUGUGAGUGGA
((((((((((.(((.((.((((((........)))))).)).)))))))).)))))..

Structure

--     -     C   G  A      aua 
  UACUC CAGAG GUG CA UCAUGu   a
  ||||| ||||| ||| || ||||||    
  GUGAG GUCUC CAC GU AGUgua   u
AG     U     -   G  C      aau

Annotation confidence Not enough data

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Genome context

JH564535.1: 690101-690158 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dno-mir-509b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-509b-5p

Accession	MIMAT0047959
Description	Dasypus novemcinctus dno-miR-509b-5p mature miRNA
Sequence	1 - UACUCCAGAGCGUGGCAAUCAUG - 23
Evidence	experimental Illumina [1]

Mature dno-miR-509b-3p

Accession	MIMAT0047960
Description	Dasypus novemcinctus dno-miR-509b-3p mature miRNA
Sequence	36 - UGACUGGCACCUCUGUGAGUGGA - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344