Stem-loop dno-mir-539

Accession

MI0039149

Description

Dasypus novemcinctus dno-mir-539 precursor miRNA

Sequence

GGAGAAAUUAUCCUUGGUGUGUUcgcuuuauuuaugaugaauCAUACAAGGACAAUUUCUUUUU
.((((((((.((((((.(((((((((.........).)))).)))))))))).))))))))...

Structure

--G        A      G    -    - uuu 
   GAGAAAUU UCCUUG UGUG UUcg c   a
   |||||||| |||||| |||| |||| |   u
   UUCUUUAA AGGAAC AUAC aagu g   u
UUU        C      -    u    a uau 

Annotation confidence Not enough data

Genome context

JH578221.1: 147994-148057 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from dno-mir-539

Mature dno-miR-539-5p

• Accession: MIMAT0047965
• Description: Dasypus novemcinctus dno-miR-539-5p mature miRNA
• Sequence: 1 - GGAGAAAUUAUCCUUGGUGUGUU - 23
• Evidence: experimental ; Illumina [1]

Mature dno-miR-539-3p

• Accession: MIMAT0047966
• Description: Dasypus novemcinctus dno-miR-539-3p mature miRNA
• Sequence: 43 - CAUACAAGGACAAUUUCUUUUU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344