Stem-loop dno-mir-541

Accession

MI0039150

Description

Dasypus novemcinctus dno-mir-541 precursor miRNA

Sequence

AAAGGAUUCUGCUGUCGGUCCCACUccaaaguuugcaaaaugggUGGUGGGCACAGAAUCCAGACU
...((((((((.((((.(..((((.(((............)))))))).)))))))))))).....

Structure

--AAA        C    G UC    U   aaguu 
     GGAUUCUG UGUC G  CCAC cca     u
     |||||||| |||| |  |||| |||      
     CCUAAGAC ACGG U  GGUg ggu     g
UCAGA        -    G --    -   aaaac 

Annotation confidence Not enough data

Genome context

JH578221.1: 164635-164700 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from dno-mir-541

Mature dno-miR-541-5p

• Accession: MIMAT0047967
• Description: Dasypus novemcinctus dno-miR-541-5p mature miRNA
• Sequence: 1 - AAAGGAUUCUGCUGUCGGUCCCACU - 25
• Evidence: experimental ; Illumina [1]

Mature dno-miR-541-3p

• Accession: MIMAT0047968
• Description: Dasypus novemcinctus dno-miR-541-3p mature miRNA
• Sequence: 45 - UGGUGGGCACAGAAUCCAGACU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344