Stem-loop dno-mir-543

Accession

MI0039152

Description

Dasypus novemcinctus dno-mir-543 precursor miRNA

Literature search

1 open access papers mention dno-mir-543
(1 sentences)

Sequence

AAGUUGCCCGUGUUUUUUUCGcuuuauuugugacgAAACAUUCGCGGUGCACUUCUU
((((.(((((((..(.((((((.........).))))).)..))))).))))))...

Structure

---    U  -     UU U     - uuu 
   AAGU GC CCGUG  U UUUCG c   a
   |||| || |||||  | ||||| |   u
   UUCA CG GGCGC  A AAAgc g   u
UUC    -  U     UU C     a ugu 

Annotation confidence Not enough data

Genome context

JH578221.1: 133459-133515 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from dno-mir-543

Mature dno-miR-543-5p

• Accession: MIMAT0047971
• Description: Dasypus novemcinctus dno-miR-543-5p mature miRNA
• Sequence: 1 - AAGUUGCCCGUGUUUUUUUCG - 21
• Evidence: experimental ; Illumina [1]

Mature dno-miR-543-3p

• Accession: MIMAT0047972
• Description: Dasypus novemcinctus dno-miR-543-3p mature miRNA
• Sequence: 36 - AAACAUUCGCGGUGCACUUCUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344