miRBase entry: dno-mir-654

Stem-loop dno-mir-654

Accession

MI0039162

Description

Dasypus novemcinctus dno-mir-654 precursor miRNA

Sequence

AUGGUGGACCGCGGAACAUGUGcuuaauucacgccaUAUGUCUGCCGACCAUCACCU
.((((((.(.(((((.(((((((.........).))))))))))).).))))))...

Structure

--A      A C     A      - uua 
   UGGUGG C GCGGA CAUGUG c   a
   |||||| | ||||| |||||| |   u
   ACUACC G CGUCU GUAUac g   u
UCC      A C     -      c cac

Annotation confidence Not enough data

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Genome context

JH578221.1: 141458-141514 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from dno-mir-654

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-654-5p

Accession	MIMAT0047990
Description	Dasypus novemcinctus dno-miR-654-5p mature miRNA
Sequence	1 - AUGGUGGACCGCGGAACAUGUG - 22
Evidence	experimental Illumina [1]

Mature dno-miR-654-3p

Accession	MIMAT0047991
Description	Dasypus novemcinctus dno-miR-654-3p mature miRNA
Sequence	37 - UAUGUCUGCCGACCAUCACCU - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344