miRBase entry: dno-mir-889

Stem-loop dno-mir-889

Accession

MI0039178

Description

Dasypus novemcinctus dno-mir-889 precursor miRNA

Sequence

AAUGGCUGUCCGUAGUAUGGUCucuauauuuaugaugaUUAAUAUCGGACAACCAUUGU
(((((.((((((..((.(((((((.........)).)))))))..)))))).)))))..

Structure

--     C      UA  A     -  uau 
  AAUGG UGUCCG  GU UGGUC uc   a
  ||||| ||||||  || ||||| ||   u
  UUACC ACAGGC  UA AUUag ag   u
UG     A      UA  -     u  uau

Annotation confidence Not enough data

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Genome context

JH578221.1: 148479-148537 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from dno-mir-889

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-889-5p

Accession	MIMAT0048022
Description	Dasypus novemcinctus dno-miR-889-5p mature miRNA
Sequence	1 - AAUGGCUGUCCGUAGUAUGGUC - 22
Evidence	experimental Illumina [1]

Mature dno-miR-889-3p

Accession	MIMAT0048023
Description	Dasypus novemcinctus dno-miR-889-3p mature miRNA
Sequence	39 - UUAAUAUCGGACAACCAUUGU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344