miRBase entry: dno-mir-1197

Stem-loop dno-mir-1197

Accession

MI0039182

Description

Dasypus novemcinctus dno-mir-1197 precursor miRNA

Sequence

CGGUUGACCAUGGUGUGUACGcuuuauuuaugccgUAGGACACAUGGUCUACUUCU
.(((.(((((((.(((.(((((.........).))))..)))))))))).)))...

Structure

--C   U       G   -G    - uuu 
   GGU GACCAUG UGU  UACG c   a
   ||| ||||||| |||  |||| |   u
   UCA CUGGUAC ACA  AUgc g   u
UCU   U       -   GG    c uau

Annotation confidence Not enough data

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Genome context

JH578221.1: 128018-128073 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from dno-mir-1197

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-1197-5p

Accession	MIMAT0048029
Description	Dasypus novemcinctus dno-miR-1197-5p mature miRNA
Sequence	1 - CGGUUGACCAUGGUGUGUACG - 21
Evidence	not_experimental

Mature dno-miR-1197-3p

Accession	MIMAT0048030
Description	Dasypus novemcinctus dno-miR-1197-3p mature miRNA
Sequence	36 - UAGGACACAUGGUCUACUUCU - 56
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344