Stem-loop ocu-let-7c

Accession

MI0039209

Description

Oryctolagus cuniculus ocu-let-7c precursor miRNA

Literature search

2 open access papers mention ocu-let-7c
(10 sentences)

Sequence

UGAGGUAGUAGGUUGUAUGGUUuagaguuacacccugggaguuaaCUGUACAACCUUCUAGCUUUCC
.(((.(((.(((((((((((((..((.(..((...))..).))))))))))))))).))).)))...

Structure

--U   G   U             ua  g ua  c 
   GAG UAG AGGUUGUAUGGUU  ga u  ca  
   ||| ||| |||||||||||||  || |  || c
   UUC AUC UCCAACAUGUCaa  uu a  gu  
CCU   G   U             --  g gg  c 

Annotation confidence Not enough data

Genome context

CM000803.1: 144548251-144548317 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-let-7c

Mature ocu-let-7c-5p

• Accession: MIMAT0048080
• Description: Oryctolagus cuniculus ocu-let-7c-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUGGUU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-let-7c-3p

• Accession: MIMAT0048081
• Description: Oryctolagus cuniculus ocu-let-7c-3p mature miRNA
• Sequence: 46 - CUGUACAACCUUCUAGCUUUCC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344