Stem-loop ocu-let-7i

Accession

MI0039214

Description

Oryctolagus cuniculus ocu-let-7i precursor miRNA

Literature search

2 open access papers mention ocu-let-7i
(10 sentences)

Sequence

UGAGGUAGUAGUUUGUGCUGUUggucggguugugacauugcccgcuguggagauaaCUGCGCAAGCUACUGCCUUGCU
.(((((((((((((((((.(((((.(((((.........)))))))........))).)))))))))))))))))...

Structure

--U                 U   --------  u     ugu 
   GAGGUAGUAGUUUGUGC GUU        gg cgggu   g
   ||||||||||||||||| |||        || |||||   a
   UUCCGUCAUCGAACGCG Caa        uc gcccg   c
UCG                 U   uagaggug  -     uua 

Annotation confidence Not enough data

Genome context

CM000793.1: 41563454-41563531 [+]

Mature ocu-let-7i-5p

• Accession: MIMAT0048089
• Description: Oryctolagus cuniculus ocu-let-7i-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGUUUGUGCUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-let-7i-3p

• Accession: MIMAT0048090
• Description: Oryctolagus cuniculus ocu-let-7i-3p mature miRNA
• Sequence: 57 - CUGCGCAAGCUACUGCCUUGCU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344