Stem-loop ocu-mir-10b

Accession

MI0039220

Description

Oryctolagus cuniculus ocu-mir-10b precursor miRNA

Literature search

65 open access papers mention ocu-mir-10b
(168 sentences)

Sequence

4829006 reads, 62763.0 reads per million, 36 experiments

UACCCUGUAGAACCGAAUUUGUgugguaucuacauagucACAGAUUCGAUUCUAGGGGAAUa
...(((.(((((.((((((((((.(.(((....))).))))))))))).))))).)))....

Structure

-UAC   G     C          u g   c 
    CCU UAGAA CGAAUUUGUg g uau u
    ||| ||||| |||||||||| | |||  
    GGG AUCUU GCUUAGACAc u aua a
aUAA   G     A          - g   c 

Annotation confidence Medium

Genome context

CM000796.1: 115709575-115709636 [+]

Mature ocu-miR-10b-5p

• Accession: MIMAT0048099
• Description: Oryctolagus cuniculus ocu-miR-10b-5p mature miRNA
• Sequence: 1 - UACCCUGUAGAACCGAAUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-10b-3p

• Accession: MIMAT0048100
• Description: Oryctolagus cuniculus ocu-miR-10b-3p mature miRNA
• Sequence: 40 - ACAGAUUCGAUUCUAGGGGAAU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344