miRBase entry: ocu-mir-15b

Stem-loop ocu-mir-15b

Accession

MI0039222

Description

Oryctolagus cuniculus ocu-mir-15b precursor miRNA

Sequence

UAGCAGCACAUCAUGGUUUACAuaauauagucaagaugCGAAUCAUAAUUUGCUGCUCUA
.(((((((.((.(((((((.(((............))).))))))).)).)))))))...

Structure

--U       C  C       A   aauau 
   AGCAGCA AU AUGGUUU CAu     a
   ||||||| || ||||||| |||      
   UCGUCGU UA UACUAAG gua     g
AUC       U  A       C   gaacu

Annotation confidence Not enough data

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Genome context

CM000803.1: 54807846-54807905 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-15b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-15b-5p

Accession	MIMAT0048103
Description	Oryctolagus cuniculus ocu-miR-15b-5p mature miRNA
Sequence	1 - UAGCAGCACAUCAUGGUUUACA - 22
Evidence	experimental Illumina [1]

Mature ocu-miR-15b-3p

Accession	MIMAT0048104
Description	Oryctolagus cuniculus ocu-miR-15b-3p mature miRNA
Sequence	39 - CGAAUCAUAAUUUGCUGCUCUA - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344