Stem-loop ocu-mir-16b

Accession

MI0039224

Description

Oryctolagus cuniculus ocu-mir-16b precursor miRNA

Sequence

1214612 reads, 7372.0 reads per million, 36 experiments

UAGCAGCACGUAAAUAUUGGCGuagugaaauaaauauuaaacACCAAUAUUAUUGUGCUGCUUUa
.(((((((((..((((((((.((.................)).))))))))..)))))))))...

Structure

--U         UA        C  agugaaa 
   AGCAGCACG  AAUAUUGG Gu       u
   |||||||||  |||||||| ||       a
   UCGUCGUGU  UUAUAACC ca       a
aUU         UA        A  aauuaua 

Annotation confidence High

Genome context

CM000803.1: 54807993-54808057 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-16b

Mature ocu-miR-16b-5p

• Accession: MIMAT0048107
• Description: Oryctolagus cuniculus ocu-miR-16b-5p mature miRNA
• Sequence: 1 - UAGCAGCACGUAAAUAUUGGCG - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-16b-3p

• Accession: MIMAT0048108
• Description: Oryctolagus cuniculus ocu-miR-16b-3p mature miRNA
• Sequence: 43 - ACCAAUAUUAUUGUGCUGCUUU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344