Stem-loop ocu-mir-20a

Accession

MI0039231

Description

Oryctolagus cuniculus ocu-mir-20a precursor miRNA

Sequence

UAAAGUGCUUAUAGUGCAGGUAGuguuuaguuaucuACUGCAUUAUGAGCACUUAAAGU
..(((((((((((((((((.(((...........)))))))))))))))))))).....

Structure

---UA                 G   uguu 
     AAGUGCUUAUAGUGCAG UAG    u
     ||||||||||||||||| |||    a
     UUCACGAGUAUUACGUC Auc    g
UGAAA                 -   uauu 

Annotation confidence Not enough data

Genome context

CM000797.1: 93068174-93068232 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ocu-mir-20a

Mature ocu-miR-20a-5p

• Accession: MIMAT0048120
• Description: Oryctolagus cuniculus ocu-miR-20a-5p mature miRNA
• Sequence: 1 - UAAAGUGCUUAUAGUGCAGGUAG - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-20a-3p

• Accession: MIMAT0048121
• Description: Oryctolagus cuniculus ocu-miR-20a-3p mature miRNA
• Sequence: 37 - ACUGCAUUAUGAGCACUUAAAGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344