Stem-loop ocu-mir-29a

Accession

MI0039243

Description

Oryctolagus cuniculus ocu-mir-29a precursor miRNA

Literature search

2 open access papers mention ocu-mir-29a
(2 sentences)

Sequence

ACUGAUUUCUUUUGGUGUUCAGAgucaauagaauuuucUAGCACCAUCUGAAAUCGGUUA
(((((((((...(((((((.((((...........)))))))))))...)))))))))..

Structure

--         UUU       C    ucaa 
  ACUGAUUUC   UGGUGUU AGAg    u
  |||||||||   ||||||| ||||    a
  UGGCUAAAG   ACCACGA Ucuu    g
AU         UCU       -    uuaa 

Annotation confidence Not enough data

Genome context

CM000796.1: 9515490-9515549 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-29a

Mature ocu-miR-29a-5p

• Accession: MIMAT0048143
• Description: Oryctolagus cuniculus ocu-miR-29a-5p mature miRNA
• Sequence: 1 - ACUGAUUUCUUUUGGUGUUCAGA - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-29a-3p

• Accession: MIMAT0048144
• Description: Oryctolagus cuniculus ocu-miR-29a-3p mature miRNA
• Sequence: 39 - UAGCACCAUCUGAAAUCGGUUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344