Stem-loop ocu-mir-30b

Accession

MI0039248

Description

Oryctolagus cuniculus ocu-mir-30b precursor miRNA

Sequence

UGUAAACAUCCUACACUCAGCUguaauacaugaauuggCUGGGAGGUGGAUGUUUACGUC
.((((((((((.((.((((((((............))))))))..))))))))))))...

Structure

--U          U  -A        uaaua 
   GUAAACAUCC AC  CUCAGCUg     c
   |||||||||| ||  ||||||||      
   CAUUUGUAGG UG  GGGUCggu     a
CUG          -  GA        uaagu 

Annotation confidence Not enough data

Genome context

CM000792.1: 150418853-150418912 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-30b

Mature ocu-miR-30b-5p

• Accession: MIMAT0048152
• Description: Oryctolagus cuniculus ocu-miR-30b-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUACACUCAGCU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-30b-3p

• Accession: MIMAT0048153
• Description: Oryctolagus cuniculus ocu-miR-30b-3p mature miRNA
• Sequence: 39 - CUGGGAGGUGGAUGUUUACGUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344