Stem-loop ocu-mir-34a

Accession

MI0039256

Description

Oryctolagus cuniculus ocu-mir-34a precursor miRNA

Literature search

245 open access papers mention ocu-mir-34a
(1402 sentences)

Sequence

1379600 reads, 2637.0 reads per million, 36 experiments

UGGCAGUGUCUUAGCUGGUUGUugugagucacagagaaggaagCAAUCAGCAAGUAUACUGCCCUa
.(((((((((((.((((((((((.....((.....))....))))))))))))).))))))))...

Structure

--U        -   A          gugag  a 
   GGCAGUGU CUU GCUGGUUGUu     uc c
   |||||||| ||| ||||||||||     || a
   CCGUCAUA GAA CGACUAACga     ag g
aUC        U   -          -agga  a 

Annotation confidence High

Genome context

CM000802.1: 140941487-140941552 [+]

Mature ocu-miR-34a-5p

• Accession: MIMAT0048167
• Description: Oryctolagus cuniculus ocu-miR-34a-5p mature miRNA
• Sequence: 1 - UGGCAGUGUCUUAGCUGGUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-34a-3p

• Accession: MIMAT0048168
• Description: Oryctolagus cuniculus ocu-miR-34a-3p mature miRNA
• Sequence: 44 - CAAUCAGCAAGUAUACUGCCCU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344