Stem-loop ocu-mir-92a-2

Accession

MI0039260

Description

Oryctolagus cuniculus ocu-mir-92a-2 precursor miRNA

Literature search

5 open access papers mention ocu-mir-92a-2
(9 sentences)

Sequence

2005006 reads, 9047.0 reads per million, 36 experiments

UGGUGGGGAUUUGUCGCAUUACUUGuguucuaugguaaagUAUUGCACUUGUCCCGGCCUGU
.(((.(((((..((.(((.(((((.............))))).)))))..))))).)))...

Structure

--U   G     UU  C   U     Guguu 
   GGU GGGAU  GU GCA UACUU     c
   ||| |||||  || ||| |||||     u
   CCG CCCUG  CA CGU AUgaa     a
UGU   G     UU  -   U     auggu 

Annotation confidence High

Genome context

CM000811.1: 108518367-108518428 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from ocu-mir-92a-2

Mature ocu-miR-92a-2-5p

• Accession: MIMAT0048175
• Description: Oryctolagus cuniculus ocu-miR-92a-2-5p mature miRNA
• Sequence: 1 - UGGUGGGGAUUUGUCGCAUUACUUG - 25
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-92a-3p

• Accession: MIMAT0048174
• Description: Oryctolagus cuniculus ocu-miR-92a-3p mature miRNA
• Sequence: 41 - UAUUGCACUUGUCCCGGCCUGU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344