Stem-loop ocu-mir-96

Accession

MI0039262

Description

Oryctolagus cuniculus ocu-mir-96 precursor miRNA

Sequence

UUUGGCACUAGCACAUUUUUGCUugugucucuccgcucugagCAAUCAUGUGCAGUGCCAAUAU
.((((((((.((((((..(((((((((......)))...))))))..))))))))))))))...

Structure

--U        A      UU      ---   uc 
   UUGGCACU GCACAU  UUGCUu   gug  u
   |||||||| ||||||  ||||||   |||   
   AACCGUGA CGUGUA  AACgag   cgc  c
UAU        -      CU      ucu   cu 

Annotation confidence Not enough data

Genome context

CM000796.1: 14827059-14827122 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ocu-mir-96

Mature ocu-miR-96-5p

• Accession: MIMAT0048178
• Description: Oryctolagus cuniculus ocu-miR-96-5p mature miRNA
• Sequence: 1 - UUUGGCACUAGCACAUUUUUGCU - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-96-3p

• Accession: MIMAT0048179
• Description: Oryctolagus cuniculus ocu-miR-96-3p mature miRNA
• Sequence: 43 - CAAUCAUGUGCAGUGCCAAUAU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344