Stem-loop ocu-mir-106b

Accession

MI0039273

Description

Oryctolagus cuniculus ocu-mir-106b precursor miRNA

Sequence

UAAAGUGCUGACAGUGCAGAUAgugguccuguccgugcuaCCGCACUGUGGGUACUUGCUG
..(((((((.(((((((.(.((((((......))..))))).))))))).)))))))....

Structure

--UA       G       A A    --  uc 
    AAGUGCU ACAGUGC G UAgu  gg  c
    ||||||| ||||||| | ||||  ||   
    UUCAUGG UGUCACG C aucg  cc  u
GUCG       G       C -    ug  ug 

Annotation confidence Not enough data

Genome context

GL018760.1: 102749-102809 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ocu-mir-106b

Mature ocu-miR-106b-5p

• Accession: MIMAT0048197
• Description: Oryctolagus cuniculus ocu-miR-106b-5p mature miRNA
• Sequence: 1 - UAAAGUGCUGACAGUGCAGAUA - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-106b-3p

• Accession: MIMAT0048198
• Description: Oryctolagus cuniculus ocu-miR-106b-3p mature miRNA
• Sequence: 41 - CCGCACUGUGGGUACUUGCUG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344