Stem-loop ocu-mir-122

Accession

MI0039275

Description

Oryctolagus cuniculus ocu-mir-122 precursor miRNA

Literature search

2 open access papers mention ocu-mir-122
(12 sentences)

Sequence

UGGAGUGUGACAAUGGUGUUUGuguccaaacuaucaAACGCCAUUAUCACACUAAAUA
...(((((((.(((((((((((............))))))))))).))))))).....

Structure

--UGG       C           ugucc 
     AGUGUGA AAUGGUGUUUG     a
     ||||||| |||||||||||      
     UCACACU UUACCGCAAac     a
AUAAA       A           uauca 

Annotation confidence Not enough data

Genome context

CM000798.1: 98912055-98912112 [+]

Mature ocu-miR-122-5p

• Accession: MIMAT0048201
• Description: Oryctolagus cuniculus ocu-miR-122-5p mature miRNA
• Sequence: 1 - UGGAGUGUGACAAUGGUGUUUG - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-122-3p

• Accession: MIMAT0048202
• Description: Oryctolagus cuniculus ocu-miR-122-3p mature miRNA
• Sequence: 37 - AACGCCAUUAUCACACUAAAUA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344