Stem-loop ocu-mir-133a

Accession

MI0039287

Description

Oryctolagus cuniculus ocu-mir-133a precursor miRNA

Sequence

AGCUGGUAAAAUGGAACCAAAUCgccucuucaauggaUUUGGUCCCCUUCAACCAGCUGU
(((((((..((.((.((((((((............)))))))).)).))..)))))))..

Structure

--       AA  U  A        gccuc 
  AGCUGGU  AA GG ACCAAAUC     u
  |||||||  || || ||||||||      
  UCGACCA  UU CC UGGUUUag     u
UG       AC  C  C        guaac 

Annotation confidence Not enough data

Genome context

CM000798.1: 63180526-63180585 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-133a

Mature ocu-miR-133a-5p

• Accession: MIMAT0048221
• Description: Oryctolagus cuniculus ocu-miR-133a-5p mature miRNA
• Sequence: 1 - AGCUGGUAAAAUGGAACCAAAUC - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-133a-3p

• Accession: MIMAT0048222
• Description: Oryctolagus cuniculus ocu-miR-133a-3p mature miRNA
• Sequence: 38 - UUUGGUCCCCUUCAACCAGCUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344