Stem-loop ocu-mir-140

Accession

MI0039298

Description

Oryctolagus cuniculus ocu-mir-140 precursor miRNA

Literature search

1 open access papers mention ocu-mir-140
(2 sentences)

Sequence

CAGUGGUUUUACCCUAUGGUAGguuacgucaugcuguucuACCACAGGGUAGAACCACGGAC
..(((((((((((((.(((((((.((.((...)))).))))))).)))))))))))))....

Structure

--CA             A       u  c  c 
    GUGGUUUUACCCU UGGUAGg ua gu  
    ||||||||||||| ||||||| || || a
    CACCAAGAUGGGA ACCAucu gu cg  
CAGG             C       u  -  u 

Annotation confidence Not enough data

Genome context

CM000794.1: 25337165-25337226 [+]

Mature ocu-miR-140-5p

• Accession: MIMAT0048241
• Description: Oryctolagus cuniculus ocu-miR-140-5p mature miRNA
• Sequence: 1 - CAGUGGUUUUACCCUAUGGUAG - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-140-3p

• Accession: MIMAT0048242
• Description: Oryctolagus cuniculus ocu-miR-140-3p mature miRNA
• Sequence: 41 - ACCACAGGGUAGAACCACGGAC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344