Stem-loop ocu-mir-142

Accession

MI0039300

Description

Oryctolagus cuniculus ocu-mir-142 precursor miRNA

Literature search

88 open access papers mention ocu-mir-142
(365 sentences)

Sequence

95098 reads, 532.0 reads per million, 36 experiments

CAUAAAGUAGAAAGCACUACUAACagcacuggagggUGUAGUGUUUCCUACUUUAUGGA
((((((((((.(((((((((...(..(....)..)..))))))))).))))))))))..

Structure

--          A         UAA ag a 
  CAUAAAGUAG AAGCACUAC   C  c c
  |||||||||| |||||||||   |  |  
  GUAUUUCAUC UUUGUGAUG   g  g u
AG          C         -Ug ga g 

Annotation confidence High

Genome context

CM000808.1: 29938908-29938966 [+]

Mature ocu-miR-142-5p

• Accession: MIMAT0048245
• Description: Oryctolagus cuniculus ocu-miR-142-5p mature miRNA
• Sequence: 1 - CAUAAAGUAGAAAGCACUACUAAC - 24
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-142-3p

• Accession: MIMAT0048246
• Description: Oryctolagus cuniculus ocu-miR-142-3p mature miRNA
• Sequence: 37 - UGUAGUGUUUCCUACUUUAUGGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344