Stem-loop ocu-mir-143

Accession

MI0039301

Description

Oryctolagus cuniculus ocu-mir-143 precursor miRNA

Literature search

1 open access papers mention ocu-mir-143
(1 sentences)

Sequence

GGUGCAGUGCUGCAUCUCUGGucaguugggagucUGAGAUGAAGCACUGUAGCUC
(.(((((((((.((((((.((((......)).)).)))))).))))))))).)..

Structure

-- G         G      U  -  ag 
  G UGCAGUGCU CAUCUC GG uc  u
  | ||||||||| |||||| || ||   
  C AUGUCACGA GUAGAG cu ag  u
CU G         A      U  g  gg 

Annotation confidence Not enough data

Genome context

CM000792.1: 31258615-31258669 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-143

Mature ocu-miR-143-5p

• Accession: MIMAT0048247
• Description: Oryctolagus cuniculus ocu-miR-143-5p mature miRNA
• Sequence: 1 - GGUGCAGUGCUGCAUCUCUGG - 21
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-143-3p

• Accession: MIMAT0048248
• Description: Oryctolagus cuniculus ocu-miR-143-3p mature miRNA
• Sequence: 35 - UGAGAUGAAGCACUGUAGCUC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344