miRBase entry: ocu-mir-145

Stem-loop ocu-mir-145

Accession

MI0039303

Description

Oryctolagus cuniculus ocu-mir-145 precursor miRNA

Literature search

2 open access papers mention ocu-mir-145
(3 sentences)

Sequence

GUCCAGUUUUCCCAGGAAUCCCUuagaugcuaagauggGGAUUCCUGGAAAUACUGUUCUU
...((((.((.((((((((((((.............)))))))))))).)).)))).....

Structure

--GUC    U  C            uagau 
     CAGU UU CCAGGAAUCCCU     g
     |||| || ||||||||||||     c
     GUCA AA GGUCCUUAGGgg     u
UUCUU    U  A            uagaa

Annotation confidence Not enough data

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Genome context

CM000792.1: 31259937-31259997 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-145

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-145-5p

Accession	MIMAT0048251
Description	Oryctolagus cuniculus ocu-miR-145-5p mature miRNA
Sequence	1 - GUCCAGUUUUCCCAGGAAUCCCU - 23
Evidence	experimental Illumina [1]

Mature ocu-miR-145-3p

Accession	MIMAT0048252
Description	Oryctolagus cuniculus ocu-miR-145-3p mature miRNA
Sequence	39 - GGAUUCCUGGAAAUACUGUUCUU - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344