Stem-loop ocu-mir-146a

Accession

MI0039304

Description

Oryctolagus cuniculus ocu-mir-146a precursor miRNA

Literature search

177 open access papers mention ocu-mir-146a
(1216 sentences)

Sequence

7705635 reads, 8309.0 reads per million, 36 experiments

UGAGAACUGAAUUCCAUGGGUUgugucagugucagaCCUGUGAAAUUUAGUUCUUCAG
.((((((((((((.((((((((.((.......)))))))))).))))))))))))...

Structure

--U            C        g  uc 
   GAGAACUGAAUU CAUGGGUU ug  a
   |||||||||||| |||||||| ||  g
   UUCUUGAUUUAA GUGUCCag ac  u
GAC            A        -  ug 

Annotation confidence High

Genome context

CM000792.1: 41906611-41906668 [+]

Mature ocu-miR-146a-5p

• Accession: MIMAT0048253
• Description: Oryctolagus cuniculus ocu-miR-146a-5p mature miRNA
• Sequence: 1 - UGAGAACUGAAUUCCAUGGGUU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-146a-3p

• Accession: MIMAT0048254
• Description: Oryctolagus cuniculus ocu-miR-146a-3p mature miRNA
• Sequence: 37 - CCUGUGAAAUUUAGUUCUUCAG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344