Stem-loop ocu-mir-147

Accession

MI0039306

Description

Oryctolagus cuniculus ocu-mir-147 precursor miRNA

Literature search

4 open access papers mention ocu-mir-147
(6 sentences)

Sequence

377 reads, 3.0 reads per million, 30 experiments

UGGAAACAUUUCUGCACAGACUagauuauggauggCAGUGUGCGGAAAUGCUUCUGCU
.((((.((((((((((((..(((.........)))...)))))))))))).))))...

Structure

--U    A            -GA   gau 
   GGAA CAUUUCUGCACA   CUa   u
   |||| ||||||||||||   |||   a
   UCUU GUAAAGGCGUGU   ggu   u
UCG    C            GAC   agg 

Annotation confidence High

Genome context

CM000806.1: 27150525-27150582 [-]

Mature ocu-miR-147-5p

• Accession: MIMAT0048257
• Description: Oryctolagus cuniculus ocu-miR-147-5p mature miRNA
• Sequence: 1 - UGGAAACAUUUCUGCACAGACU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-147-3p

• Accession: MIMAT0048258
• Description: Oryctolagus cuniculus ocu-miR-147-3p mature miRNA
• Sequence: 36 - CAGUGUGCGGAAAUGCUUCUGCU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344