Stem-loop ocu-mir-181a-2

Accession

MI0039316

Description

Oryctolagus cuniculus ocu-mir-181a-2 precursor miRNA

Literature search

1 open access papers mention ocu-mir-181a-2
(1 sentences)

Sequence

9119155 reads, 43528.0 reads per million, 36 experiments

AACAUUCAACGCUGUCGGUGAGUuugggauuugaaaaaACCACCGACCGUUGACUGUACC
.(((.((((((..(((((((.((((...........))))))))))))))))).)))...

Structure

--A   U      CU       A    ggga 
   ACA UCAACG  GUCGGUG GUuu    u
   ||| ||||||  ||||||| ||||    u
   UGU AGUUGC  CAGCCAC CAaa    u
CCA   C      --       -    aaag 

Annotation confidence High

Genome context

GL018699.1: 2614666-2614725 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-181a-2

Mature ocu-miR-181a-5p

• Accession: MIMAT0048275
• Description: Oryctolagus cuniculus ocu-miR-181a-5p mature miRNA
• Sequence: 1 - AACAUUCAACGCUGUCGGUGAGU - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-181a-2-3p

• Accession: MIMAT0048277
• Description: Oryctolagus cuniculus ocu-miR-181a-2-3p mature miRNA
• Sequence: 39 - ACCACCGACCGUUGACUGUACC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344