Stem-loop ocu-mir-187

Accession

MI0039326

Description

Oryctolagus cuniculus ocu-mir-187 precursor miRNA

Literature search

16 open access papers mention ocu-mir-187
(52 sentences)

Sequence

13550 reads, 53.0 reads per million, 33 experiments

gGCUACAACACAGGACCCGGGCGcugcucugaccccUCGUGUCUUGUGUUGCAGCCGG
((((.(((((((((((.((((.((......).).)).)).))))))))))).))))..

Structure

--    A           C  -  C - ug 
  gGCU CAACACAGGAC CG GG G c  c
  |||| ||||||||||| || || | |   
  CCGA GUUGUGUUCUG GC cc c g  u
GG    C           U  U  c a uc 

Annotation confidence High

Genome context

CM000798.1: 77158808-77158865 [-]

Mature ocu-miR-187-5p

• Accession: MIMAT0048295
• Description: Oryctolagus cuniculus ocu-miR-187-5p mature miRNA
• Sequence: 2 - GCUACAACACAGGACCCGGGCG - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-187-3p

• Accession: MIMAT0048296
• Description: Oryctolagus cuniculus ocu-miR-187-3p mature miRNA
• Sequence: 37 - UCGUGUCUUGUGUUGCAGCCGG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344