Stem-loop ocu-mir-188

Accession

MI0039327

Description

Oryctolagus cuniculus ocu-mir-188 precursor miRNA

Sequence

CAUCCCUUGCAUGGUGGAGGGugagcuuuaugaaaacccCUCCCACAUGCAGGGUUUGCA
((..(((((((((..((((((....(.....).....))))))..)))))))))..))..

Structure

--  UC         GU      -ugag u 
  CA  CCUUGCAUG  GGAGGG     c u
  ||  |||||||||  ||||||     | u
  GU  GGGACGUAC  CCUCcc     g a
AC  UU         AC      caaaa u 

Annotation confidence Not enough data

Genome context

CM000811.1: 34232654-34232713 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from ocu-mir-188

Mature ocu-miR-188-5p

• Accession: MIMAT0048297
• Description: Oryctolagus cuniculus ocu-miR-188-5p mature miRNA
• Sequence: 1 - CAUCCCUUGCAUGGUGGAGGG - 21
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-188-3p

• Accession: MIMAT0048298
• Description: Oryctolagus cuniculus ocu-miR-188-3p mature miRNA
• Sequence: 40 - CUCCCACAUGCAGGGUUUGCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344