Stem-loop ocu-mir-195

Accession

MI0039333

Description

Oryctolagus cuniculus ocu-mir-195 precursor miRNA

Sequence

UAGCAGCACAGAAAUAUUGGCAccgggaggcgagucugCCAAUAUUGGCUGUGCUGCUCCAggc
.((((((((((.(((((((((((((.....)).))..)))))))))..))))))))))......

Structure

-----U          -A         --  -  g 
      AGCAGCACAG  AAUAUUGGC  Ac cg g
      ||||||||||  |||||||||  || || a
      UCGUCGUGUC  UUAUAACCg  ug gc g
cggACC          GG         uc  a  g 

Annotation confidence Not enough data

Genome context

CM000808.1: 12026542-12026605 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-195

Mature ocu-miR-195-5p

• Accession: MIMAT0048309
• Description: Oryctolagus cuniculus ocu-miR-195-5p mature miRNA
• Sequence: 1 - UAGCAGCACAGAAAUAUUGGCA - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-195-3p

• Accession: MIMAT0048310
• Description: Oryctolagus cuniculus ocu-miR-195-3p mature miRNA
• Sequence: 39 - CCAAUAUUGGCUGUGCUGCUCCA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344