Stem-loop ocu-mir-216a

Accession

MI0039350

Description

Oryctolagus cuniculus ocu-mir-216a precursor miRNA

Sequence

UAAUCUCAGCUGGCAACUGUGAGauauucauacaaucccuCACAGUGGUCUCUGGGGUUAUG
(((((((((..(((.((((((((..(((.....)))..)))))))).))).)))))))))..

Structure

--         CU   A        au   c 
  UAAUCUCAG  GGC ACUGUGAG  auu a
  |||||||||  ||| ||||||||  ||| u
  AUUGGGGUC  CUG UGACACuc  uaa a
GU         -U   G        cc   c 

Annotation confidence Not enough data

Genome context

CM000791.1: 130101540-130101601 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-216a

Mature ocu-miR-216a-5p

• Accession: MIMAT0048341
• Description: Oryctolagus cuniculus ocu-miR-216a-5p mature miRNA
• Sequence: 1 - UAAUCUCAGCUGGCAACUGUGAG - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-216a-3p

• Accession: MIMAT0048342
• Description: Oryctolagus cuniculus ocu-miR-216a-3p mature miRNA
• Sequence: 41 - CACAGUGGUCUCUGGGGUUAUG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344