miRBase entry: ocu-mir-217

Stem-loop ocu-mir-217

Accession

MI0039352

Description

Oryctolagus cuniculus ocu-mir-217 precursor miRNA

Sequence

AUACUGCAUCAGGAACUGAUUGgauaagaaucugucaccAUCAGUUCCUAAUGCAUUGCCU
....(((((.((((((((((.(((((......)))).).)))))))))).)))))......

Structure

--AUAC     C          U -    ag 
      UGCAU AGGAACUGAU G gaua  a
      ||||| |||||||||| | ||||   
      ACGUA UCCUUGACUA c cugu  a
UCCGUU     A          c a    cu

Annotation confidence Not enough data

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Genome context

CM000791.1: 130108838-130108898 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-217

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-217-5p

Accession	MIMAT0048345
Description	Oryctolagus cuniculus ocu-miR-217-5p mature miRNA
Sequence	1 - AUACUGCAUCAGGAACUGAUUG - 22
Evidence	experimental Illumina [1]

Mature ocu-miR-217-3p

Accession	MIMAT0048346
Description	Oryctolagus cuniculus ocu-miR-217-3p mature miRNA
Sequence	40 - AUCAGUUCCUAAUGCAUUGCCU - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344