Stem-loop ocu-mir-223

Accession

MI0039359

Description

Oryctolagus cuniculus ocu-mir-223 precursor miRNA

Literature search

2 open access papers mention ocu-mir-223
(52 sentences)

Sequence

CGUGUAUUUGACAAGCUGAGUUGgacacuccgugugguagagUGUCAGUUUGUCAAAUACCCCAA
...((((((((((((((......(((((((.........))))))))))))))))))))).....

Structure

--CGU              GAGUUG       cgu 
     GUAUUUGACAAGCU      gacacuc   g
     ||||||||||||||      |||||||   u
     CAUAAACUGUUUGA      CUGUgag   g
AACCC              ------       aug 

Annotation confidence Not enough data

Genome context

CM000811.1: 44537362-44537426 [+]

Mature ocu-miR-223-5p

• Accession: MIMAT0048358
• Description: Oryctolagus cuniculus ocu-miR-223-5p mature miRNA
• Sequence: 1 - CGUGUAUUUGACAAGCUGAGUUG - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-223-3p

• Accession: MIMAT0048359
• Description: Oryctolagus cuniculus ocu-miR-223-3p mature miRNA
• Sequence: 43 - UGUCAGUUUGUCAAAUACCCCAA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344