Stem-loop ocu-mir-328

Accession

MI0039368

Description

Oryctolagus cuniculus ocu-mir-328 precursor miRNA

Literature search

1 open access papers mention ocu-mir-328
(1 sentences)

Sequence

GGGGGGCAGGAGGGGCUCAGGGagaaaagugugcagcccCUGGCCCUCUCUGCCCUUCCG
((((((((((.(((((.(((((...............)))))))))).))))))))))..

Structure

--          A     U     agaaaa 
  GGGGGGCAGG GGGGC CAGGG      g
  |||||||||| ||||| |||||      u
  CUUCCCGUCU UCCCG GUCcc      g
GC          C     -     cgacgu 

Annotation confidence Not enough data

Genome context

CM000794.1: 22813812-22813871 [-]

Mature ocu-miR-328-5p

• Accession: MIMAT0048376
• Description: Oryctolagus cuniculus ocu-miR-328-5p mature miRNA
• Sequence: 1 - GGGGGGCAGGAGGGGCUCAGGG - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-328-3p

• Accession: MIMAT0048377
• Description: Oryctolagus cuniculus ocu-miR-328-3p mature miRNA
• Sequence: 40 - CUGGCCCUCUCUGCCCUUCCG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344