Stem-loop ocu-mir-335

Accession

MI0039371

Description

Oryctolagus cuniculus ocu-mir-335 precursor miRNA

Literature search

44 open access papers mention ocu-mir-335
(270 sentences)

Sequence

7810 reads, 68.0 reads per million, 35 experiments

UCAAGAGCAAUAACGAAAAAUGUUugucauaaaccGUUUUUCAUUAUUGCUCCUGACC
(((.(((((((((.((((((((.((......)).)))))))).))))))))).)))..

Structure

--   A         C        U  gu 
  UCA GAGCAAUAA GAAAAAUG Uu  c
  ||| ||||||||| |||||||| ||   
  AGU CUCGUUAUU CUUUUUGc aa  a
CC   C         A        c  au 

Annotation confidence High

Genome context

CM000796.1: 14144944-14145001 [-]

Mature ocu-miR-335-5p

• Accession: MIMAT0048382
• Description: Oryctolagus cuniculus ocu-miR-335-5p mature miRNA
• Sequence: 1 - UCAAGAGCAAUAACGAAAAAUGUU - 24
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-335-3p

• Accession: MIMAT0048383
• Description: Oryctolagus cuniculus ocu-miR-335-3p mature miRNA
• Sequence: 36 - GUUUUUCAUUAUUGCUCCUGACC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344