Stem-loop ocu-mir-337

Accession

MI0039372

Description

Oryctolagus cuniculus ocu-mir-337 precursor miRNA

Literature search

13 open access papers mention ocu-mir-337
(27 sentences)

Sequence

15155 reads, 50.0 reads per million, 25 experiments

GAACGGCUUCAUACAGGAGUUgauugcacagucauccagCUCCUAUAUGAUGCCUUUCUUC
(((.(((.(((((.((((((((..((......))..)))))))).))))).))).)))...

Structure

---   C   U     C        au  ca 
   GAA GGC UCAUA AGGAGUUg  ug  c
   ||| ||| ||||| ||||||||  ||   
   CUU CCG AGUAU UCCUCgac  ac  a
CUU   U   U     A        cu  ug 

Annotation confidence High

Genome context

GL019048.1: 1562-1622 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ocu-mir-337

Mature ocu-miR-337-5p

• Accession: MIMAT0048384
• Description: Oryctolagus cuniculus ocu-miR-337-5p mature miRNA
• Sequence: 1 - GAACGGCUUCAUACAGGAGUU - 21
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-337-3p

• Accession: MIMAT0048385
• Description: Oryctolagus cuniculus ocu-miR-337-3p mature miRNA
• Sequence: 40 - CUCCUAUAUGAUGCCUUUCUUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344