Stem-loop ocu-mir-342

Accession

MI0039374

Description

Oryctolagus cuniculus ocu-mir-342 precursor miRNA

Sequence

AGGGGUGCUCUCUGUGCGUGAGGGACAuggcaaucgaauugUCUCACACAGAAAUCGCACCCUCU
.(((((((..((((((.....((((((...(....)...)))))).))))))....)))))))..

Structure

-A       --UC      CGUGA      ugg a 
  GGGGUGC    UCUGUG     GGGACA   c a
  |||||||    ||||||     ||||||   |  
  UCCCACG    AGACAC     CUCUgu   g u
UC       CUAA      ----A      uaa c 

Annotation confidence Not enough data

Genome context

GL018955.1: 21272-21336 [-]

Mature ocu-miR-342-5p

• Accession: MIMAT0048388
• Description: Oryctolagus cuniculus ocu-miR-342-5p mature miRNA
• Sequence: 1 - AGGGGUGCUCUCUGUGCGUGAGGGACA - 27
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-342-3p

• Accession: MIMAT0048389
• Description: Oryctolagus cuniculus ocu-miR-342-3p mature miRNA
• Sequence: 42 - UCUCACACAGAAAUCGCACCCUCU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344