Stem-loop ocu-mir-376c-1

Accession

MI0039389

Description

Oryctolagus cuniculus ocu-mir-376c-1 precursor miRNA

Sequence

2305 reads, 10.0 reads per million, 25 experiments

GUGGAUUUUCCUUCUAUGUUUacgugauugcugguuaAUCAUAGAGGAAAAUCCAUGU
((((((((((((.(((((...((..........))....)))))))))))))))))..

Structure

--            U     -UUU  guga 
  GUGGAUUUUCCU CUAUG    ac    u
  |||||||||||| |||||    ||     
  UACCUAAAAGGA GAUAC    ug    u
UG            -     UAau  gucg 

Annotation confidence High

Genome context

GL019048.1: 133511-133568 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from ocu-mir-376c-1

Mature ocu-miR-376c-5p

• Accession: MIMAT0048416
• Description: Oryctolagus cuniculus ocu-miR-376c-5p mature miRNA
• Sequence: 1 - GUGGAUUUUCCUUCUAUGUUU - 21
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-376c-3p

• Accession: MIMAT0048417
• Description: Oryctolagus cuniculus ocu-miR-376c-3p mature miRNA
• Sequence: 38 - AUCAUAGAGGAAAAUCCAUGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344