miRBase entry: ocu-mir-376c-1

Stem-loop ocu-mir-376c-1

Accession

MI0039389

Description

Oryctolagus cuniculus ocu-mir-376c-1 precursor miRNA

Sequence

GUGGAUUUUCCUUCUAUGUUUAcgugauugcugguuaAUCAUAGAGGAAAAUCCAUGU
((((((((((((.(((((...((..........))....)))))))))))))))))..

Structure

--            U     -UUU  guga 
  GUGGAUUUUCCU CUAUG    Ac    u
  |||||||||||| |||||    ||     
  UACCUAAAAGGA GAUAC    ug    u
UG            -     UAau  gucg

Annotation confidence Not enough data

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Genome context

GL019048.1: 133511-133568 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from ocu-mir-376c-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-376c-5p

Accession	MIMAT0048416
Description	Oryctolagus cuniculus ocu-miR-376c-5p mature miRNA
Sequence	1 - GUGGAUUUUCCUUCUAUGUUUA - 22
Evidence	experimental Illumina [1]

Mature ocu-miR-376c-3p

Accession	MIMAT0048417
Description	Oryctolagus cuniculus ocu-miR-376c-3p mature miRNA
Sequence	38 - AUCAUAGAGGAAAAUCCAUGU - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344