miRBase entry: ocu-mir-377

Stem-loop ocu-mir-377

Accession

MI0039391

Description

Oryctolagus cuniculus ocu-mir-377 precursor miRNA

Sequence

AGAGGUUGCCCUUGGUGAAUUCgcuuuauugauguugaAUCACACAAAGGCAACUUUUGU
((((((((((.(((((((.(((((.........).)))))))).))).))))))))))..

Structure

--          C   -    A    - uuu 
  AGAGGUUGCC UUG GUGA UUCg c   a
  |||||||||| ||| |||| |||| |   u
  UUUUCAACGG AAC CACU Aagu g   u
UG          A   A    -    u uag

Annotation confidence Not enough data

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Genome context

GL019048.1: 150228-150287 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from ocu-mir-377

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-377-5p

Accession	MIMAT0048419
Description	Oryctolagus cuniculus ocu-miR-377-5p mature miRNA
Sequence	1 - AGAGGUUGCCCUUGGUGAAUUC - 22
Evidence	experimental Illumina [1]

Mature ocu-miR-377-3p

Accession	MIMAT0048420
Description	Oryctolagus cuniculus ocu-miR-377-3p mature miRNA
Sequence	39 - AUCACACAAAGGCAACUUUUGU - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344