Stem-loop ocu-mir-381

Accession

MI0039394

Description

Oryctolagus cuniculus ocu-mir-381 precursor miRNA

Sequence

AGCGAGGUUGCCCUGUGUAUAUUcuguuuauugacaugcaaUAUACAAGGGCAAGCUCUCUGU
((.(((.(((((((.(((((((((((((....)))).).))))))))))))))).))).))..

Structure

--  C   G       G        - -    u 
  AG GAG UUGCCCU UGUAUAUU c uguu a
  || ||| ||||||| |||||||| | ||||  
  UC CUC AACGGGA ACAUAUaa g acag u
UG  U   G       -        c u    u 

Annotation confidence Not enough data

Genome context

GL019048.1: 136582-136644 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from ocu-mir-381

Mature ocu-miR-381-5p

• Accession: MIMAT0048425
• Description: Oryctolagus cuniculus ocu-miR-381-5p mature miRNA
• Sequence: 1 - AGCGAGGUUGCCCUGUGUAUAUU - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-381-3p

• Accession: MIMAT0048426
• Description: Oryctolagus cuniculus ocu-miR-381-3p mature miRNA
• Sequence: 42 - UAUACAAGGGCAAGCUCUCUGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344